plot_flight_curve_multi Plot annual flight curves from multi-year BAM model with each year displayed in a different color.

plot_flight_curve_multi Plot annual flight curves from multi-year BAM model with each year displayed in a different color.

Usage

plot_flight_curve_multi(
  ts_flight_curve_multi,
  SelectYear = NULL,
  TimeUnit = "d",
  weekday = 3,
  color_palette = "rainbow",
  add_legend = TRUE,
  legend_pos = "topright",
  line_width = 2,
  ymax = NULL,
  ylab = "Relative abundance (NM)",
  xlab = "Date",
  main = NULL,
  ...
)

Arguments

ts_flight_curve_multi

pheno_curve object returned by flight_curve_multi or a data.table with flight curve data.

SelectYear

integer or vector of years to plot, default NULL (plot all years).

TimeUnit

character Time-step used, 'd' for day or 'w' for week, default 'd'.

weekday

Integer for selected day of the week for weekly data, default is 3 (Wednesday). [1-7] where 1 = Monday.

color_palette

string Name of color palette to use. Options: "rainbow", "heat", "terrain", "topo", "cm", "viridis", or a vector of color names/hex codes.

add_legend

logical Add legend to plot, default TRUE.

legend_pos

string Position of legend: "topright", "topleft", "bottomright", "bottomleft", "top", "bottom", "left", "right", default "topright".

line_width

numeric Width of lines, default 2.

ymax

numeric Maximum value for y-axis, default NULL (auto-scale).

ylab

string Label for y-axis, default "Relative abundance (NM)".

xlab

string Label for x-axis, default "Date".

main

string Main title for plot, default NULL.

...

Additional parameters passed to base plot function.

Value

Returns a base plot with relative abundance (y) over time (x), with each year in a different color.

See also

flight_curve_multi, fit_bam_multi

Author

Reto Schmucki - retoshm@ceh.ac.uk